Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTGGGCAACTGCGAGCAGCTGCGGG
((((((((((((((((.....&.))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024301
GeneSymbolFKRP
Binding site1397,1424
Score0.923
Seed1
Au0.324
Energy-23.0
Binding len22
Me-3.938
Phylopstem3.7352119149999985
Phylopflank4.01572385625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure