Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTCGGGCTGCCCCCCAACATTGAGGCTGCGGCAGTGTCA
.((((((((((((((((((((&))).)))...............))))))))))..).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024302
GeneSymbolMMP28
Binding site1361,1401
Score0.885
Seed1
Au0.485
Energy-24.4
Binding len40
Me-3.793
Phylopstem3.9146676666666655
Phylopflank3.6618663087500005
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure