Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGAGCTGCAGATCCTGCC
..((((((((((((.(..(((&))).).))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024303
GeneSymbolZSCAN5A
Binding site970,992
Score0.846
Seed1
Au0.324
Energy-19.1
Binding len22
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure