Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGACTCCAGGAGCTGCAGC
((((((((.(((...(((((.&)))))...)).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024320
GeneSymbolPRR15L
Binding site1,23
Score0.846
Seed1
Au0.462
Energy-21.6
Binding len22
Me-7.875
Phylopstem-0.8444205375
Phylopflank-0.31345128000000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure