Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCGGCGGGCAGCTGTG
..((((((((.(((((.(((.&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024321
GeneSymbolRBM42
Binding site546,565
Score0.846
Seed1
Au0.294
Energy-22.9
Binding len19
Me-7.782
Phylopstem3.0350026249999997
Phylopflank2.45260993625
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure