Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTAGCCTGGAAACAATCGCAGAGTCCAGCGCCCAGAGTCCAGGATGCCAGCTGCT
..((((((((((((((.((((&.))))....))))))))).............................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024323
GeneSymbolBRME1
Binding site461,520
Score0.846
Seed1
Au0.309
Energy-20.1
Binding len53
Me-4.957
Phylopstem-0.01612037953488373
Phylopflank0.05072264075000005
Longest consecutive pairings9
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure