Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTCTCAGCCACAGGGAGCTGCAT
.(((((((.((((((..((..&))..)))))....).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024325
GeneSymbolZNF343
Binding site2666,2689
Score0.846
Seed1
Au0.397
Energy-20.4
Binding len23
Me-5.083
Phylopstem-0.42274685714285715
Phylopflank-0.13311761375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure