Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGGGGCCTGCAGCTGCAGC
((((((((((((((.(..(((&))).).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024328
GeneSymbolTHTPA
Binding site2346,2368
Score1.0
Seed1
Au0.426
Energy-24.0
Binding len22
Me-4.673
Phylopstem3.9893032
Phylopflank1.9821023500000006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure