Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACTGCCTCCGCAGCTGCGGC
((((((((((((..(((..((&))..)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024330
GeneSymbolSLC27A3
Binding site711,733
Score0.846
Seed1
Au0.206
Energy-26.5
Binding len22
Me-6.084
Phylopstem1.8948886666666667
Phylopflank1.35688581
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure