Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTGGCCGCAGTTGCGC
.((((((((((((((..((((&)))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024330
GeneSymbolSLC27A3
Binding site152,172
Score1.0
Seed1
Au0.353
Energy-25.5
Binding len20
Me-4.026
Phylopstem0.25545372857142856
Phylopflank0.78190131125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure