Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCTCCTCGTCAACTACCACAGCTGTAGA
(((((((((.(((((((.(((&))).))))..............))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024331
GeneSymbolTTPAL
Binding site439,475
Score0.923
Seed1
Au0.456
Energy-21.4
Binding len36
Me-5.18
Phylopstem3.2713839300000003
Phylopflank4.939040571749997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure