Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCGTGTGCTGCT
..(((((((((((...(((((&))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024334
GeneSymbolTMEM43
Binding site1711,1729
Score0.846
Seed1
Au0.441
Energy-20.9
Binding len18
Me-6.782
Phylopstem-1.2277485833333333
Phylopflank-0.10869454125000004
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure