Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCAGCCGCACTGACGAG
((((((.(((((((((.((((&)))).)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024336
GeneSymbolIRX3
Binding site1318,1340
Score0.885
Seed0
Au0.397
Energy-25.5
Binding len22
Me-5.481
Phylopstem5.470627111111112
Phylopflank5.226907907000001
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure