Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAGCTGCAGGCAACAGCTGCC
..((((((((((((((.(((.&))).))))))))).......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024339
GeneSymbolTHOC6
Binding site1239,1265
Score0.872
Seed1
Au0.412
Energy-23.1
Binding len26
Me-4.957
Phylopstem2.8492778047619045
Phylopflank2.544058255
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure