Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCAACCAGCAGCCTGCC
..(((((((((((((..((((&.))))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024339
GeneSymbolTHOC6
Binding site1196,1222
Score0.846
Seed1
Au0.324
Energy-23.0
Binding len21
Me-5.19
Phylopstem2.1282215066666663
Phylopflank2.46770416125
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure