Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTTCCCGGCTGCC
..(((((((.((..((.(((.&)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024341
GeneSymbolZNF557
Binding site203,220
Score0.846
Seed1
Au0.353
Energy-20.3
Binding len17
Me-8.345
Phylopstem-0.775853857142857
Phylopflank-0.30336592500000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure