Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTATGGCTGCAGTGAATGTGGG
(((((((((((((((((.(((&))).))))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024341
GeneSymbolZNF557
Binding site775,800
Score1.0
Seed1
Au0.529
Energy-19.6
Binding len25
Me-3.938
Phylopstem0.60947391
Phylopflank-0.02881127999999998
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure