Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCCGCTACTCACGGGCTGA
...((((((((((((((((((&))))))))))).))........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024408
GeneSymbolNOTCH2
Binding site5900,5928
Score1.0
Seed0
Au0.353
Energy-23.7
Binding len28
Me-6.515
Phylopstem2.0088094296296295
Phylopflank3.248405256749999
Longest consecutive pairings11
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure