Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTGCTCCCTGCAATGCCAGGC
.((((((((....(((((....&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024411
GeneSymbolPDYN
Binding site355,379
Score0.846
Seed1
Au0.426
Energy-19.0
Binding len15
Me-12.497
Phylopstem1.189905875
Phylopflank0.4670311999999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure