Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGACTCTAAAACTATCAGCAGCGGCAGCAGCAGC
((((.(((((.(((((.....&.))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024411
GeneSymbolPDYN
Binding site1227,1265
Score0.846
Seed0
Au0.471
Energy-21.7
Binding len18
Me-10.881
Phylopstem0.13519370000000003
Phylopflank0.04135248750000001
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end3
Position3UTR
2D Structure