Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAACATTGCAGTTA
....(((((((((((((((..&))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024415
GeneSymbolDDX4
Binding site2402,2420
Score0.923
Seed0
Au0.676
Energy-18.0
Binding len18
Me-9.547
Phylopstem0.5198752705882353
Phylopflank1.15289310475
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure