Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAACCCAGCTGGGAC
((.((((((.((((.(.....&).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024415
GeneSymbolDDX4
Binding site1258,1274
Score0.923
Seed0
Au0.574
Energy-17.2
Binding len16
Me-7.473
Phylopstem2.5360678666666665
Phylopflank4.271836855
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure