Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAGCTGCAGG
((((((((.((((........&)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024417
GeneSymbolFDXR
Binding site406,420
Score1.0
Seed1
Au0.324
Energy-21.2
Binding len14
Me-6.819
Phylopstem4.516582
Phylopflank2.9824963450000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure