Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCTGCAGCTGCT
..(((((((((((((...((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024418
GeneSymbolTSPOAP1
Binding site3825,3841
Score1.0
Seed1
Au0.382
Energy-25.1
Binding len16
Me-5.19
Phylopstem3.183111169230769
Phylopflank4.434495651250001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure