Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCAGCTGCGGC
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024419
GeneSymbolPGS1
Binding site26,43
Score0.846
Seed1
Au0.25
Energy-24.9
Binding len17
Me-6.762
Phylopstem0.93908633
Phylopflank1.740841913636363
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure