Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCAGCAGCTTCACCAGGAGCAAG
((((((((((.((((((.(((&))).)))))).)))))).........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024419
GeneSymbolPGS1
Binding site1544,1575
Score0.846
Seed1
Au0.397
Energy-22.7
Binding len31
Me-6.762
Phylopstem5.212981842105262
Phylopflank3.7459944720000005
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure