Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGATGATGATGAACTGGATGCAGCTGTAGCA
.....((((((((((((.(((&.)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024420
GeneSymbolPLA2G4A
Binding site1699,1734
Score0.974
Seed0
Au0.588
Energy-19.0
Binding len20
Me-13.666
Phylopstem4.16411505
Phylopflank3.4697241337499993
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure