Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACTCGCTGCAGCTGGGGT
((.((((((((((.(((....&)))..)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024423
GeneSymbolDSC3
Binding site3725,3744
Score0.897
Seed0
Au0.471
Energy-20.7
Binding len19
Me-6.352
Phylopstem-0.10299618000000002
Phylopflank-0.11617820374999992
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure