Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCACCGACAGCTGCAC
.((((((((((((.(...(((&))).).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024426
GeneSymbolWT1
Binding site1007,1027
Score0.923
Seed1
Au0.309
Energy-22.4
Binding len20
Me-4.883
Phylopstem0.5135852307692308
Phylopflank0.21057466930000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure