Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCCAGAGCTGCAGC
((((((((..(((((.(((((&))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024493
GeneSymbolZKSCAN3
Binding site1398,1419
Score0.923
Seed1
Au0.471
Energy-26.0
Binding len21
Me-6.47
Phylopstem-0.3187234875
Phylopflank1.672935827499999
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure