Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAAAAACTGTGGCCTGCAGA
((((((((((((((....(((&)))....))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024501
GeneSymbolHOXD1
Binding site1135,1158
Score1.0
Seed1
Au0.382
Energy-21.3
Binding len23
Me-4.906
Phylopstem0.045013980000000016
Phylopflank0.4576859187500002
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure