Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCCGTGTGACCAGGG
.((((((((((...(((((((.&))))))).))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024503
GeneSymbolHIVEP3
Binding site11924,11944
Score0.846
Seed1
Au0.397
Energy-22.3
Binding len20
Me-9.286
Phylopstem0.4963218909090909
Phylopflank1.0791005025
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure