Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGGAGAGACGACTAGAGATGGCTAGACTGCAGCTCGCAT
.(((((((((((((.......&.)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024511
GeneSymbolHAUS3
Binding site979,1023
Score0.923
Seed1
Au0.544
Energy-20.1
Binding len16
Me-4.762
Phylopstem-0.08047172428571432
Phylopflank0.2729750015000001
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end1
PositionCDS
2D Structure