Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATGCAACCTCTGAAGATGCAGTTGTAC
.((((((((((((((((.((.&)).))))))).........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024514
GeneSymbolCYP2R1
Binding site1165,1194
Score0.923
Seed1
Au0.574
Energy-22.3
Binding len29
Me-3.793
Phylopstem5.06185944
Phylopflank3.5856373075
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure