Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGTGGCGGGTGAAAGCGACCTGTGTCAGAGCTGCAAT
((((((((((((((((.....&.)))))).)).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024524
GeneSymbolATP13A3
Binding site697,739
Score0.846
Seed1
Au0.485
Energy-19.4
Binding len24
Me-3.938
Phylopstem1.9042521002272728
Phylopflank1.6435998675625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure