Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGCAGCTGCT
..((((((((((((((.....&.)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024526
GeneSymbolEPS8L3
Binding site319,365
Score0.923
Seed1
Au0.397
Energy-22.9
Binding len17
Me-4.957
Phylopstem1.59600564
Phylopflank0.9838824637499997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure