Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCTCCCGAGCAGCTGGGAC
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024528
GeneSymbolNKAP
Binding site3980,4006
Score0.846
Seed0
Au0.397
Energy-21.7
Binding len26
Me-5.728
Phylopstem0.18978988888888895
Phylopflank-0.06362962499999997
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure