Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATTGCCCAGGCTGG
...(((((..(((.(((((((&))))))).)))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024528
GeneSymbolNKAP
Binding site4065,4084
Score0.846
Seed0
Au0.515
Energy-20.1
Binding len19
Me-9.67
Phylopstem-0.15542514285714285
Phylopflank-0.09893567499999995
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure