Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGAAGGACACAGCCGCGCAGTGTGGTCCTGCAC
.(((((.((((((((((((((&)))))........)))))))))..........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024532
GeneSymbolSPAG16
Binding site1310,1348
Score0.846
Seed0
Au0.426
Energy-19.7
Binding len38
Me-5.337
Phylopstem2.2876561272727276
Phylopflank3.0467877125000005
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure