Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTAAATGTGTGCCAGGC
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024533
GeneSymbolCHST5
Binding site3219,3239
Score0.962
Seed1
Au0.529
Energy-20.3
Binding len13
Me-6.908
Phylopstem-0.10446734545454542
Phylopflank-0.14463491062500006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure