Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAACAGCTCAGCTGTT
..(((((((.((((((.((((&))))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024534
GeneSymbolERVMER34-1
Binding site1345,1366
Score0.846
Seed1
Au0.456
Energy-20.8
Binding len21
Me-6.2
Phylopstem-0.18363085714285715
Phylopflank0.24390686999999997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure