Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGGCCGCGGCTGA
...((((((((((((((....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024536
GeneSymbolCHPF
Binding site20,35
Score1.0
Seed0
Au0.297
Energy-25.6
Binding len15
Me-6.515
Phylopstem1.2962752857142859
Phylopflank0.29947421375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure