Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGTGCTGCCTCCGAAGAGACTCTGCCGCAGCTT
....((((((((((.((((((&)))))).).....................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024544
GeneSymbolMUL1
Binding site1619,1658
Score0.923
Seed0
Au0.426
Energy-20.6
Binding len39
Me-10.282
Phylopstem3.9948302451612903
Phylopflank3.2614696712500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure