Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACAGCTGCCAAATGCTGCT
..(((((.((((((((.((((&)))).)))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024545
GeneSymbolSAP130
Binding site896,920
Score0.923
Seed0
Au0.441
Energy-23.2
Binding len24
Me-7.271
Phylopstem3.9488350500000005
Phylopflank5.266207551250001
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure