Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTATGCAATCTGGCTGTAAA
(((((((((.(((((((.(((&))).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024549
GeneSymbolTCTN1
Binding site1317,1338
Score0.923
Seed1
Au0.559
Energy-19.6
Binding len21
Me-5.18
Phylopstem3.5231824444444446
Phylopflank1.4254679325000001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure