Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTATAGAGACAAATTGAAACAACAGCAAGCTGCAGT
((((((((((.(((((.....&.))))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024553
GeneSymbolVPS50
Binding site363,401
Score0.923
Seed1
Au0.618
Energy-20.9
Binding len19
Me-6.762
Phylopstem3.925557727272727
Phylopflank4.5705844012500005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure