Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGGCCGGGATCGCGGAAAGTGATGGCTGTC
..(((((((((((((((((((&))))))))))))................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024573
GeneSymbolARMT1
Binding site53,89
Score0.923
Seed1
Au0.353
Energy-21.1
Binding len36
Me-4.957
Phylopstem0.15572222857142853
Phylopflank1.11783991875
Longest consecutive pairings12
Position of longest consecutive pairings24
Pairings in 3prime end8
Position5UTR
2D Structure