Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGGGATGTATCCCAGGA
.(((((.(((((.(.(((((((&))))))).).))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024577
GeneSymbolSH3TC2
Binding site5808,5830
Score0.846
Seed0
Au0.632
Energy-20.1
Binding len22
Me-7.362
Phylopstem-0.08741385714285717
Phylopflank-0.06785721874999998
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure