Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGGGGCTGCAGT
((((((((.((((((......&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024577
GeneSymbolSH3TC2
Binding site5087,5103
Score0.897
Seed1
Au0.485
Energy-22.5
Binding len16
Me-5.227
Phylopstem0.316540625
Phylopflank0.03481211000000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure