Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGTGCTAGGGCAGCTGCT
..(((((((((((..((((((&))))))..)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024577
GeneSymbolSH3TC2
Binding site2386,2409
Score1.0
Seed1
Au0.412
Energy-22.8
Binding len23
Me-6.549
Phylopstem0.08457244285714285
Phylopflank0.24219348249999992
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure